activity
20162023
most citedA Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology

271 citations · 603 across the 47 of their papers we have counts for

collaborators
Showing 2023Show all

12 papers · 1 filter

cs.CV2023★ 3 cited

A skeletonization algorithm for gradient-based optimization

Martin J. Menten, Johannes C. Paetzold, Veronika A. Zimmer +6

The skeleton of a digital image is a compact representation of its topology, geometry, and scale. It has utility in many computer vision applications, such as image description, se…

cs.CY2023★ 39 cited

FUTURE-AI: International consensus guideline for trustworthy and deployable artificial intelligence in healthcare

Karim Lekadir, Aasa Feragen, Abdul Joseph Fofanah +117

Despite major advances in artificial intelligence (AI) for medicine and healthcare, the deployment and adoption of AI technologies remain limited in real-world clinical practice. I…

eess.IV2023

Bias in Unsupervised Anomaly Detection in Brain MRI

Cosmin I. Bercea, Esther Puyol-Antón, Benedikt Wiestler +3

Unsupervised anomaly detection methods offer a promising and flexible alternative to supervised approaches, holding the potential to revolutionize medical scan analysis and enhance…

eess.IV2023

ICoNIK: Generating Respiratory-Resolved Abdominal MR Reconstructions Using Neural Implicit Representations in k-Space

Veronika Spieker, Wenqi Huang, Hannah Eichhorn +7

Motion-resolved reconstruction for abdominal magnetic resonance imaging (MRI) remains a challenge due to the trade-off between residual motion blurring caused by discretized motion…

eess.IV2023

Sparse annotation strategies for segmentation of short axis cardiac MRI

Josh Stein, Maxime Di Folco, Julia Schnabel

Short axis cardiac MRI segmentation is a well-researched topic, with excellent results achieved by state-of-the-art models in a supervised setting. However, annotating MRI volumes…

eess.IV2023★ 1 cited

Attribute Regularized Soft Introspective VAE: Towards Cardiac Attribute Regularization Through MRI Domains

Maxime Di Folco, Cosmin Bercea, Julia A. Schnabel

Deep generative models have emerged as influential instruments for data generation and manipulation. Enhancing the controllability of these models by selectively modifying data att…

cs.CV2023★ 11 cited

Mask, Stitch, and Re-Sample: Enhancing Robustness and Generalizability in Anomaly Detection through Automatic Diffusion Models

Cosmin I. Bercea, Michael Neumayr, Daniel Rueckert +1

The introduction of diffusion models in anomaly detection has paved the way for more effective and accurate image reconstruction in pathologies. However, the current limitations in…

eess.IV2023★ 81 cited

Deep Learning for Retrospective Motion Correction in MRI: A Comprehensive Review

Veronika Spieker, Hannah Eichhorn, Kerstin Hammernik +4

Motion represents one of the major challenges in magnetic resonance imaging (MRI). Since the MR signal is acquired in frequency space, any motion of the imaged object leads to comp…

eess.IV2023

Reversing the Abnormal: Pseudo-Healthy Generative Networks for Anomaly Detection

Cosmin I Bercea, Benedikt Wiestler, Daniel Rueckert +1

Early and accurate disease detection is crucial for patient management and successful treatment outcomes. However, the automatic identification of anomalies in medical images can b…

eess.IV2023

3D Masked Autoencoders with Application to Anomaly Detection in Non-Contrast Enhanced Breast MRI

Daniel M. Lang, Eli Schwartz, Cosmin I. Bercea +2

Self-supervised models allow (pre-)training on unlabeled data and therefore have the potential to overcome the need for large annotated cohorts. One leading self-supervised model i…

eess.IV2023★ 6 cited

Physics-Aware Motion Simulation for T2*-Weighted Brain MRI

Hannah Eichhorn, Kerstin Hammernik, Veronika Spieker +4

In this work, we propose a realistic, physics-aware motion simulation procedure for T2*-weighted magnetic resonance imaging (MRI) to improve learning-based motion correction. As T2…

cs.CV2023★ 6 cited

Fully transformer-based biomarker prediction from colorectal cancer histology: a large-scale multicentric study

Sophia J. Wagner, Daniel Reisenbüchler, Nicholas P. West +28

Background: Deep learning (DL) can extract predictive and prognostic biomarkers from routine pathology slides in colorectal cancer. For example, a DL test for the diagnosis of micr…