2 papers
cs.DS2017
Ranking vertices for active module recovery problem
Javlon E. Isomurodov, Alexander A. Loboda, Alexey A. Sergushichev
Selecting a connected subnetwork enriched in individually important vertices is an approach commonly used in many areas of bioinformatics, including analysis of gene expression dat…
cs.DS2016
Solving generalized maximum-weight connected subgraph problem for network enrichment analysis
Alexander A. Loboda, Maxim N. Artyomov, Alexey A. Sergushichev
Network enrichment analysis methods allow to identify active modules without being biased towards a priori defined pathways. One of mathematical formulations of such analysis is a…