3 papers
cs.CR2020
Genome Reconstruction Attacks Against Genomic Data-Sharing Beacons
Kerem Ayoz, Erman Ayday, A. Ercument Cicek
Sharing genome data in a privacy-preserving way stands as a major bottleneck in front of the scientific progress promised by the big data era in genomics. A community-driven protoc…
q-bio.GN2019
Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm
Can Firtina, Jeremie S. Kim, Mohammed Alser +4
Long reads produced by third-generation sequencing technologies are used to construct an assembly (i.e., the subject's genome), which is further used in downstream genome analysis.…
cs.CR2016
Privacy-Related Consequences of Turkish Citizen Database Leak
Erin Avllazagaj, Erman Ayday, A. Ercument Cicek
Personal data is collected and stored more than ever by the governments and companies in the digital age. Even though the data is only released after anonymization, deanonymization…