activity
20162022
most citedPROJECTION Algorithm for Motif Finding on GPUs

4 citations · 11 across the 8 of their papers we have counts for

collaborators

8 papers

q-bio.MN2022★ 1 cited

Predicting the Biological Classification of Cell-Cycle Regulated Genes of Saccharomyces cerevisiae using Community Detection Algorithms on Gene Co-expression Networks

Jhoirene B. Clemente, Gabriel Besas, Jerick Callado +1

The conventional approach for analyzing gene expression data involves clustering algorithms. Cluster analyses provide partitioning of the set of genes that can predict biological c…

cs.CC2022★ 2 cited

Solving the Online Assignment Problem with Machine Learned Advice

Clarence Gabriel R. Kasilag, Pollux M. Rey, Jhoirene B. Clemente

The online assignment problem plays an important role in operational research and computer science which is why immense attention has been given to improving its solution quality.…

cs.DS2022★ 1 cited

Some Optimization Solutions for Relief Distribution

Jhoirene Clemente, Jessie James Suarez, Olivia Demetria +2

Humanitarian logistics remain a challenging area of application for operations research. In relief distribution, the main goal is to deliver all the supplies to those that are in n…

cs.DS2017

Reoptimization of the Closest Substring Problem under Pattern Length Modification

Jhoirene B. Clemente, Henry N. Adorna

This study investigates whether reoptimization can help in solving the closest substring problem. We are dealing with the following reoptimization scenario. Suppose, we have an opt…

cs.OH2017★ 3 cited

Characterizing Classes of Potential Outliers through Traffic Data Set Data Signature 2D nMDS Projection

Erlo Robert F. Oquendo, Jhoirene B. Clemente, Jasmine A. Malinao +1

This paper presents a formal method for characterizing the potential outliers from the data signature projection of traffic data set using Non-Metric Multidimensional Scaling (nMDS…

cs.DS2017

Advice Complexity of the Online Search Problem

Jhoirene Clemente, Juraj Hromkovic, Dennis Komm +1

The online search problem is a fundamental problem in finance. The numerous direct applications include searching for optimal prices for commodity trading and trading foreign curre…

cs.DC2016★ 4 cited

PROJECTION Algorithm for Motif Finding on GPUs

Jhoirene B. Clemente, Francis George C. Cabarle, Henry N. Adorna

Motif finding is one of the NP-complete problems in Computational Biology. Existing nondeterministic algorithms for motif finding do not guarantee the global optimality of results…

cs.DS2016

On Self-Reducibility and Reoptimization of Closest Substring Problem

Jeffrey Aborot, Henry Adorna, Jhoirene Clemente

In this paper, we define the reoptimization variant of the closest substring problem (CSP) under sequence addition. We show that, even with the additional information we have about…