86 citations · 157 across the 8 of their papers we have counts for
3 papers · 1 filter
Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs
Antoine Limasset, Jean-Francois Flot, Pierre Peterlongo
Motivations Short-read accuracy is important for downstream analyses such as genome assembly and hybrid long-read correction. Despite much work on short-read correction, present-da…
A resource-frugal probabilistic dictionary and applications in bioinformatics
Camille Marchet, Lolita Lecompte, Antoine Limasset +2
Indexing massive data sets is extremely expensive for large scale problems. In many fields, huge amounts of data are currently generated, however extracting meaningful information…
Fast and scalable minimal perfect hashing for massive key sets
Antoine Limasset, Guillaume Rizk, Rayan Chikhi +1
Minimal perfect hash functions provide space-efficient and collision-free hashing on static sets. Existing algorithms and implementations that build such functions have practical l…