474 citations · 518 across the 4 of their papers we have counts for
4 papers · 1 filter
CABS-flex 2.0: a web server for fast simulations of flexibility of protein structures
Aleksander Kuriata, Aleksandra Maria Gierut, Tymoteusz Oleniecki +4
Classical simulations of protein flexibility remain computationally expensive, especially for large proteins. A few years ago, we developed a fast method for predicting protein str…
Flexible protein-peptide docking using CABS-dock with knowledge about the binding site
Mateusz Kurcinski, Maciej Pawel Ciemny, Maciej Blaszczyk +2
Despite considerable efforts, structural prediction of protein-peptide complexes is still a very challenging task, mainly due to two reasons: high flexibility of the peptides and t…
Towards protein-protein docking with significant structural changes using CABS-dock
Maciej Pawel Ciemny, Mateusz Kurcinski, Andrzej Kolinski +1
The protein-protein interactions (PPIs) are crucial for understanding the majority of cellular processes. PPIs play important role in gene transcription regulation, cellular signal…
Highly flexible protein-peptide docking using CABS-dock
Maciej Pawel Ciemny, Mateusz Kurcinski, Konrad Jakub Kozak +2
Protein-peptide molecular docking is a difficult modeling problem. It is even more challenging when significant conformational changes that may occur during the binding process nee…