44 citations · 51 across the 4 of their papers we have counts for
4 papers
Implicit neural representations for joint decomposition and registration of gene expression images in the marmoset brain
Michal Byra, Charissa Poon, Tomomi Shimogori +1
We propose a novel image registration method based on implicit neural representations that addresses the challenging problem of registering a pair of brain images with similar anat…
Improving Segmentation of Objects with Varying Sizes in Biomedical Images using Instance-wise and Center-of-Instance Segmentation Loss Function
Muhammad Febrian Rachmadi, Charissa Poon, Henrik Skibbe
In this paper, we propose a novel two-component loss for biomedical image segmentation tasks called the Instance-wise and Center-of-Instance (ICI) loss, a loss function that addres…
An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain
Charissa Poon, Muhammad Febrian Rachmadi, Michal Byra +4
We present the first automated pipeline to create an atlas of in situ hybridization gene expression in the adult marmoset brain in the same stereotaxic space. The pipeline consists…
Deep Learning Convolutional Networks for Multiphoton Microscopy Vasculature Segmentation
Petteri Teikari, Marc Santos, Charissa Poon +1
Recently there has been an increasing trend to use deep learning frameworks for both 2D consumer images and for 3D medical images. However, there has been little effort to use deep…