54 citations · 83 across the 10 of their papers we have counts for
10 papers
Computational optimisation of slow cooling profiles for the cryopreservation of cells in suspension
Jack Lee Jennings, Sanja Bojic, Lukas Breitwieser +2
The cryopreservation of biological materials is a highly complex process, as it involves numerous factors such as the cooling and thawing procedures, the administration of cryoprot…
TeraAgent: A Distributed Agent-Based Simulation Engine for Simulating Half a Trillion Agents
Lukas Breitwieser, Ahmad Hesam, Abdullah Giray Yağlıkçı +3
Agent-based simulation is a method for studying highly complex systems in disciplines as diverse as biology, medicine, sociology, economics, finance, and more. In this method, an a…
Design and Analysis of an Extreme-Scale, High-Performance, and Modular Agent-Based Simulation Platform
Lukas Johannes Breitwieser
Agent-based modeling is indispensable for studying complex systems across many domains. However, existing simulation platforms exhibit two major issues: performance and modularity.…
Calibration of stochastic, agent-based neuron growth models with Approximate Bayesian Computation
Tobias Duswald, Lukas Breitwieser, Thomas Thorne +2
Understanding how genetically encoded rules drive and guide complex neuronal growth processes is essential to comprehending the brain's architecture, and agent-based models (ABMs)…
High-Performance and Scalable Agent-Based Simulation with BioDynaMo
Lukas Breitwieser, Ahmad Hesam, Fons Rademakers +2
Agent-based modeling plays an essential role in gaining insights into biology, sociology, economics, and other fields. However, many existing agent-based simulation platforms are n…
GPU Acceleration of 3D Agent-Based Biological Simulations
Ahmad Hesam, Lukas Breitwieser, Fons Rademakers +1
Researchers in biology are faced with the tough challenge of developing high-performance computer simulations of their increasingly complex agent-based models. BioDynaMo is an open…
BioDynaMo: a general platform for scalable agent-based simulation
Lukas Breitwieser, Ahmad Hesam, Jean de Montigny +10
Motivation: Agent-based modeling is an indispensable tool for studying complex biological systems. However, existing simulators do not always take full advantage of modern hardware…
The BioDynaMo Project: Creating a Platform for Large-Scale Reproducible Biological Simulations
Lukas Breitwieser, Roman Bauer, Alberto Di Meglio +6
Computer simulations have become a very powerful tool for scientific research. In order to facilitate research in computational biology, the BioDynaMo project aims at a general pla…
The BioDynaMo Project: a platform for computer simulations of biological dynamics
Leonard Johard, Lukas Breitwieser, Alberto Di Meglio +3
This paper is a brief update on developments in the BioDynaMo project, a new platform for computer simulations for biological research. We will discuss the new capabilities of the…
The BioDynaMo Project
Roman Bauer, Lukas Breitwieser, Alberto Di Meglio +5
Computer simulations have become a very powerful tool for scientific research. Given the vast complexity that comes with many open scientific questions, a purely analytical or expe…