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20162021
most citedLearning for Biomedical Information Extraction: Methodological Review of Recent Advances

32 citations · 120 across the 11 of their papers we have counts for

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9 papers · 1 filter

cs.CL2021★ 21 cited

Membership Inference Attack Susceptibility of Clinical Language Models

Abhyuday Jagannatha, Bhanu Pratap Singh Rawat, Hong Yu

Deep Neural Network (DNN) models have been shown to have high empirical privacy leakages. Clinical language models (CLMs) trained on clinical data have been used to improve perform…

cs.CL2020

Calibrating Structured Output Predictors for Natural Language Processing

Abhyuday Jagannatha, Hong Yu

We address the problem of calibrating prediction confidence for output entities of interest in natural language processing (NLP) applications. It is important that NLP applications…

cs.CL2020★ 7 cited

Towards Automatic Generation of Questions from Long Answers

Shlok Kumar Mishra, Pranav Goel, Abhishek Sharma +3

Automatic question generation (AQG) has broad applicability in domains such as tutoring systems, conversational agents, healthcare literacy, and information retrieval. Existing eff…

cs.CL2020★ 8 cited

Continual Domain-Tuning for Pretrained Language Models

Subendhu Rongali, Abhyuday Jagannatha, Bhanu Pratap Singh Rawat +1

Pre-trained language models (LM) such as BERT, DistilBERT, and RoBERTa can be tuned for different domains (domain-tuning) by continuing the pre-training phase on a new target domai…

cs.CL2018★ 1 cited

Active Learning for New Domains in Natural Language Understanding

Stanislav Peshterliev, John Kearney, Abhyuday Jagannatha +2

We explore active learning (AL) for improving the accuracy of new domains in a natural language understanding (NLU) system. We propose an algorithm called Majority-CRF that uses an…

cs.CL2016★ 1 cited

Ranking medical jargon in electronic health record notes by adapted distant supervision

Jinying Chen, Abhyuday N. Jagannatha, Samah J. Jarad +1

Objective: Allowing patients to access their own electronic health record (EHR) notes through online patient portals has the potential to improve patient-centered care. However, me…

cs.CL2016★ 27 cited

Structured prediction models for RNN based sequence labeling in clinical text

Abhyuday Jagannatha, Hong Yu

Sequence labeling is a widely used method for named entity recognition and information extraction from unstructured natural language data. In clinical domain one major application…

cs.CL2016★ 13 cited

Bidirectional Recurrent Neural Networks for Medical Event Detection in Electronic Health Records

Abhyuday Jagannatha, Hong Yu

Sequence labeling for extraction of medical events and their attributes from unstructured text in Electronic Health Record (EHR) notes is a key step towards semantic understanding…

cs.CL2016★ 32 cited

Learning for Biomedical Information Extraction: Methodological Review of Recent Advances

Feifan Liu, Jinying Chen, Abhyuday Jagannatha +1

Biomedical information extraction (BioIE) is important to many applications, including clinical decision support, integrative biology, and pharmacovigilance, and therefore it has b…