activity
20052024
most citedAn expanded evaluation of protein function prediction methods shows an improvement in accuracy

457 citations · 486 across the 7 of their papers we have counts for

collaborators

7 papers

gr-qc2024★ 7 cited

When gravitational decoupling and quantum gravity (re)unite

R. Casadio, I. Kuntz, R. da Rocha

The effective action for quantum gravity coupled to matter contains corrections arising from the functional measure. We analyse the effect of such corrections for anisotropic self-…

gr-qc2024★ 12 cited

Gravitational decoupling and aerodynamics: black holes and analog gravity in a jet propulsion lab

R. Casadio, C. Noberto Souza, R. da Rocha

A connection is established between transonic sound waves propagating along a de Laval nozzle and quasinormal modes emitted from hairy black holes obtained with the gravitational d…

q-bio.QM2016★ 457 cited

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

Yuxiang Jiang, Tal Ronnen Oron, Wyatt T Clark +144

Background: The increasing volume and variety of genotypic and phenotypic data is a major defining characteristic of modern biomedical sciences. At the same time, the limitations i…

q-bio.BM2007★ 5 cited

A three-state prediction of single point mutations on protein stability changes

Emidio Capriotti, Piero Fariselli, Ivan Rossi +1

A basic question of protein structural studies is to which extent mutations affect the stability. This question may be addressed starting from sequence and/or from structure. In pr…

q-bio.BM2007

In silico evidence of the relationship between miRNAs and siRNAs

Ludovica Montanucci, Piero Fariselli, Pier Luigi Martelli +2

Both short interfering RNAs (siRNAs) and microRNAs (miRNAs) mediate the repression of specific sequences of mRNA through the RNA interference pathway. In the last years several exp…

q-bio.BM2006★ 3 cited

The evaluation of protein folding rate constant is improved by predicting the folding kinetic order with a SVM-based method

Emidio Capriotti, Rita Casadio

Protein folding is a problem of large interest since it concerns the mechanism by which the genetic information is translated into proteins with well defined three-dimensional (3D)…