1k citations · 1.7k across the 19 of their papers we have counts for
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Predicting diverse M-best protein contact maps
Siqi Sun, Jianzhu Ma, Sheng Wang +1
Protein contacts contain important information for protein structure and functional study, but contact prediction from sequence information remains very challenging. Recently evolu…
AUC-maximized Deep Convolutional Neural Fields for Sequence Labeling
Sheng Wang, Siqi Sun, Jinbo Xu
Deep Convolutional Neural Networks (DCNN) has shown excellent performance in a variety of machine learning tasks. This manuscript presents Deep Convolutional Neural Fields (DeepCNF…
Learning Nonparametric Forest Graphical Models with Prior Information
Yuancheng Zhu, Zhe Liu, Siqi Sun
We present a framework for incorporating prior information into nonparametric estimation of graphical models. To avoid distributional assumptions, we restrict the graph to be a for…
Learning Scale-Free Networks by Dynamic Node-Specific Degree Prior
Qingming Tang, Siqi Sun, Jinbo Xu
Learning the network structure underlying data is an important problem in machine learning. This paper introduces a novel prior to study the inference of scale-free networks, which…