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q-bio.QM2016★ 1k cited
Fast coalescent-based computation of local branch support from quartet frequencies
Erfan Sayyari, Siavash Mirarab
Species tree reconstruction is complicated by effects of Incomplete Lineage Sorting (ILS), commonly modeled by the multi-species coalescent model. While there has been substantial…
q-bio.QM2014★ 122 cited
Weighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses
Md. Shamsuzzoha Bayzid, Siavash Mirarab, Bastien Boussau +1
Because biological processes can make different loci have different evolutionary histories, species tree estimation requires multiple loci from across the genome. While many proces…