activity
20122020
most cited3DMolNet: A Generative Network for Molecular Structures

25 citations · 110 across the 15 of their papers we have counts for

collaborators

17 papers

q-bio.BM2020★ 25 cited

3DMolNet: A Generative Network for Molecular Structures

Vitali Nesterov, Mario Wieser, Volker Roth

With the recent advances in machine learning for quantum chemistry, it is now possible to predict the chemical properties of compounds and to generate novel molecules. Existing gen…

cs.CV2020

Learning Extremal Representations with Deep Archetypal Analysis

Sebastian Mathias Keller, Maxim Samarin, Fabricio Arend Torres +2

Archetypes are typical population representatives in an extremal sense, where typicality is understood as the most extreme manifestation of a trait or feature. In linear feature sp…

cs.LG2020★ 1 cited

Inverse Learning of Symmetries

Mario Wieser, Sonali Parbhoo, Aleksander Wieczorek +1

Symmetry transformations induce invariances which are frequently described with deep latent variable models. In many complex domains, such as the chemical space, invariances can be…

cs.LG2019★ 10 cited

On the Difference Between the Information Bottleneck and the Deep Information Bottleneck

Aleksander Wieczorek, Volker Roth

Combining the Information Bottleneck model with deep learning by replacing mutual information terms with deep neural nets has proved successful in areas ranging from generative mod…

cs.LG2019★ 8 cited

Optimizing for Interpretability in Deep Neural Networks with Tree Regularization

Mike Wu, Sonali Parbhoo, Michael C. Hughes +2

Deep models have advanced prediction in many domains, but their lack of interpretability remains a key barrier to the adoption in many real world applications. There exists a large…

cs.LG2019★ 8 cited

Regional Tree Regularization for Interpretability in Black Box Models

Mike Wu, Sonali Parbhoo, Michael Hughes +5

The lack of interpretability remains a barrier to the adoption of deep neural networks. Recently, tree regularization has been proposed to encourage deep neural networks to resembl…

math.NA2019★ 1 cited

Tensor B-Spline Numerical Methods for PDEs: a High-Performance Alternative to FEM

Dmytro Shulga, Oleksii Morozov, Volker Roth +2

Tensor B-spline methods are a high-performance alternative to solve partial differential equations (PDEs). This paper gives an overview on the principles of Tensor B-spline methodo…

cs.LG2019

Deep Archetypal Analysis

Sebastian Mathias Keller, Maxim Samarin, Mario Wieser +1

"Deep Archetypal Analysis" generates latent representations of high-dimensional datasets in terms of fractions of intuitively understandable basic entities called archetypes. The p…

cs.CV2018★ 6 cited

Informed MCMC with Bayesian Neural Networks for Facial Image Analysis

Adam Kortylewski, Mario Wieser, Andreas Morel-Forster +4

Computer vision tasks are difficult because of the large variability in the data that is induced by changes in light, background, partial occlusion as well as the varying pose, tex…

stat.ME2018

Estimating Causal Effects With Partial Covariates For Clinical Interpretability

Sonali Parbhoo, Mario Wieser, Volker Roth

Estimating the causal effects of an intervention in the presence of confounding is a frequently occurring problem in applications such as medicine. The task is challenging since th…

stat.ML2018

Cause-Effect Deep Information Bottleneck For Systematically Missing Covariates

Sonali Parbhoo, Mario Wieser, Aleksander Wieczorek +1

Estimating the causal effects of an intervention from high-dimensional observational data is difficult due to the presence of confounding. The task is often complicated by the fact…

stat.ML2018★ 13 cited

Learning Sparse Latent Representations with the Deep Copula Information Bottleneck

Aleksander Wieczorek, Mario Wieser, Damian Murezzan +1

Deep latent variable models are powerful tools for representation learning. In this paper, we adopt the deep information bottleneck model, identify its shortcomings and propose a m…

stat.ML2016★ 5 cited

Causal Compression

Aleksander Wieczorek, Volker Roth

We propose a new method of discovering causal relationships in temporal data based on the notion of causal compression. To this end, we adopt the Pearlian graph setting and the dir…

stat.ML2015

Bayesian Markov Blanket Estimation

Dinu Kaufmann, Sonali Parbhoo, Aleksander Wieczorek +3

This paper considers a Bayesian view for estimating a sub-network in a Markov random field. The sub-network corresponds to the Markov blanket of a set of query variables, where the…

cs.LG2015★ 1 cited

Probabilistic Clustering of Time-Evolving Distance Data

Julia E. Vogt, Marius Kloft, Stefan Stark +4

We present a novel probabilistic clustering model for objects that are represented via pairwise distances and observed at different time points. The proposed method utilizes the in…

stat.ME2012★ 20 cited

Copula Mixture Model for Dependency-seeking Clustering

Melanie Rey, Volker Roth

We introduce a copula mixture model to perform dependency-seeking clustering when co-occurring samples from different data sources are available. The model takes advantage of the g…

cs.LG2012★ 12 cited

A Complete Analysis of the l_1,p Group-Lasso

Julia Vogt, Volker Roth

The Group-Lasso is a well-known tool for joint regularization in machine learning methods. While the l_{1,2} and the l_{1,\infty} version have been studied in detail and efficient…