collaborators

5 papers

physics.bio-ph2025

Unifying Theories in High-Dimensional Biology: Approaches, Challenges and Opportunities

Marianne Bauer, Akshit Goyal, Sidhartha Goyal +19

Across biological subdisciplines, the last decade has seen an explosion of high-dimensional datasets, including datasets for cells, species, immune systems, neurons and behaviour.…

cond-mat.stat-mech2025

Identifying nonequilibrium degrees of freedom in high-dimensional stochastic systems

Catherine Ji, Ravin Raj, Benjamin Eysenbach +1

Any coarse-grained description of a nonequilibrium system should faithfully represent its latent irreversible degrees of freedom. However, standard dimensionality reduction methods…

cs.LG2025

In-Context Learning Strategies Emerge Rationally

Daniel Wurgaft, Ekdeep Singh Lubana, Core Francisco Park +3

Recent work analyzing in-context learning (ICL) has identified a broad set of strategies that describe model behavior in different experimental conditions. We aim to unify these fi…

q-bio.GN2025

Inferring genotype-phenotype maps using attention models

Krishna Rijal, Caroline M. Holmes, Samantha Petti +3

Predicting phenotype from genotype is a central challenge in genetics. Traditional approaches in quantitative genetics typically analyze this problem using methods based on linear…

cs.LG2024

Differential learning kinetics govern the transition from memorization to generalization during in-context learning

Alex Nguyen, Gautam Reddy

Transformers exhibit in-context learning (ICL): the ability to use novel information presented in the context without additional weight updates. Recent work shows that ICL emerges…