261 citations · 1.3k across the 50 of their papers we have counts for
50 papers
Biophysical Model for Signal-Embedded Droplet Soaking into 2D Cell Culture
Ibrahim Isik, Hamidreza Arjmandi, Christophe Corre +1
Using agar plates hosting a 2D cell population stimulated with signaling molecules is crucial for experiments such as gene regulation and drug discovery in a wide range of biologic…
Diffusive Molecular Communication with a Spheroidal Receiver for Organ-on-Chip Systems
Hamidreza Arjmandi, Mohamad Zoofaghari, Mitra Rezaei +5
Realistic models of the components and processes are required for molecular communication (MC) systems. In this paper, a spheroidal receiver structure is proposed for MC that is in…
Membrane Fusion-Based Transmitter Design for Static and Diffusive Mobile Molecular Communication Systems
Xinyu Huang, Yuting Fang, Adam Noel +1
This paper proposes a novel imperfect transmitter (TX) model, namely the membrane fusion (MF)-based TX, that adopts MF between a vesicle and the TX membrane to release molecules en…
Membrane Fusion-Based Transmitter Design for Molecular Communication Systems
Xinyu Huang, Yuting Fang, Adam Noel +1
This paper proposes a novel imperfect spherical transmitter (TX) model, namely the membrane fusion (MF)-based TX, that adopts MF between a vesicle and the TX membrane to release mo…
A Survey of Molecular Communication in Cell Biology: Establishing a New Hierarchy for Interdisciplinary Applications
Dadi Bi, Apostolos Almpanis, Adam Noel +2
Molecular communication (MC) engineering is inspired by the use of chemical signals as information carriers in cell biology. The biological nature of chemical signaling makes MC a…
Characterization of Cooperators in Quorum Sensing with 2D Molecular Signal Analysis
Yuting Fang, Adam Noel, Andrew W. Eckford +2
In quorum sensing (QS), bacteria exchange molecular signals to work together. An analytically-tractable model is presented for characterizing QS signal propagation within a populat…
Parameter Estimation in a Noisy 1D Environment via Two Absorbing Receivers
Xinyu Huang, Yuting Fang, Adam Noel +1
This paper investigates the estimation of different parameters, e.g., propagation distance and flow velocity, by utilizing two fully-absorbing receivers (RXs) in a one-dimensional…
Channel Characterization for 1D Molecular Communication with Two Absorbing Receivers
Xinyu Huang, Yuting Fang, Adam Noel +1
This letter develops a one-dimensional (1D) diffusion-based molecular communication system to analyze channel responses between a single transmitter (TX) and two fully-absorbing re…
Modeling Interference-Free Neuron Spikes with Optogenetic Stimulation
Adam Noel, Shayan Monabbati, Dimitrios Makrakis +1
This paper predicts the ability to externally control the firing times of a cortical neuron whose behavior follows the Izhikevich neuron model. The Izhikevich neuron model provides…
Molecular Information Delivery in Porous Media
Yuting Fang, Weisi Guo, Matteo Icardi +2
Information delivery via molecular signals is abundant in nature and potentially useful for industry sensing. Many propagation channels (e.g., tissue membranes and catalyst beds) c…
Channel Modeling for Diffusive Molecular Communication - A Tutorial Review
Vahid Jamali, Arman Ahmadzadeh, Wayan Wicke +2
Molecular communication (MC) is a new communication engineering paradigm where molecules are employed as information carriers. MC systems are expected to enable new revolutionary a…
Expected Density of Cooperative Bacteria in a 2D Quorum Sensing Based Molecular Communication System
Yuting Fang, Adam Noel, Andrew W. Eckford +1
The exchange of small molecular signals within microbial populations is generally referred to as quorum sensing (QS). QS is ubiquitous in nature and enables microorganisms to respo…
Diffusive Molecular Communication in a Biological Spherical Environment with Partially Absorbing Boundary
Hamidreza Arjmandi, Mohammad Zoofaghari, Adam Noel
Diffusive molecular communication (DMC) is envisioned as a promising approach to help realize healthcare applications within bounded biological environments. In this paper, a DMC s…
A Novel A Priori Simulation Algorithm for Absorbing Receivers in Diffusion-Based Molecular Communication Systems
Yiran Wang, Adam Noel, Nan Yang
A novel a priori Monte Carlo (APMC) algorithm is proposed to accurately simulate the molecules absorbed at spherical receiver(s) with low computational complexity in diffusion-base…
Algorithm for Mesoscopic Advection-Diffusion
Adam Noel, Dimitrios Makrakis
In this paper, an algorithm is presented to calculate the transition rates between adjacent mesoscopic subvolumes in the presence of flow and diffusion. These rates can be integrat…
A New Simulation Algorithm for Absorbing Receiver in Molecular Communication
Yiran Wang, Adam Noel, Nan Yang
The simulation of diffusion-based molecular communication systems with absorbing receivers often requires a high computational complexity to produce accurate results. In this work,…
Symbol-by-Symbol Maximum Likelihood Detection for Cooperative Molecular Communication
Yuting Fang, Adam Noel, Nan Yang +2
In this paper, symbol-by-symbol maximum likelihood (ML) detection is proposed for a cooperative diffusion-based molecular communication (MC) system. In this system, the transmitter…
Using Game Theory for Real-Time Behavioural Dynamics in Microscopic Populations with Noisy Signalling
Adam Noel, Yuting Fang, Nan Yang +2
This paper introduces the application of game theory to understand noisy real-time signalling and the resulting behavioural dynamics in microscopic populations such as bacteria and…
Modeling Duct Flow for Molecular Communication
Wayan Wicke, Tobias Schwering, Arman Ahmadzadeh +3
Active transport such as fluid flow is sought in molecular communication to extend coverage, improve reliability, and mitigate interference. Flow models are often over-simplified,…
Timing Control of Single Neuron Spikes with Optogenetic Stimulation
Adam Noel, Shayan Monabbati, Dimitrios Makrakis +1
This paper predicts the ability to externally control the firing times of a cortical neuron whose behavior follows the Izhikevich neuron model. The Izhikevich neuron model provides…
Simplified Cooperative Detection for Multi-Receiver Molecular Communication
Yuting Fang, Adam Noel, Yiran Wang +1
Diffusion-based molecular communication (MC) systems experience significant reliability losses. To boost the reliability, an MC scheme where multiple receivers (RXs) work cooperati…
Effect of Local Population Uncertainty on Cooperation in Bacteria
Adam Noel, Yuting Fang, Nan Yang +2
Bacteria populations rely on mechanisms such as quorum sensing to coordinate complex tasks that cannot be achieved by a single bacterium. Quorum sensing is used to measure the loca…
Distortion Distribution of Neural Spike Train Sequence Matching with Optogenetics
Adam Noel, Dimitrios Makrakis, Andrew W. Eckford
This paper uses a simple optogenetic model to compare the timing distortion between a randomly-generated target spike sequence and an externally-stimulated neuron spike sequence. O…
Analyzing Large-Scale Multiuser Molecular Communication via 3D Stochastic Geometry
Yansha Deng, Adam Noel, Weisi Guo +2
Information delivery using chemical molecules is an integral part of biology at multiple distance scales and has attracted recent interest in bioengineering and communication theor…