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cs.DS2015
Linear Algorithm for Conservative Degenerate Pattern Matching
Maxime Crochemore, Costas S. Iliopoulos, Ritu Kundu +2
A degenerate symbol x* over an alphabet A is a non-empty subset of A, and a sequence of such symbols is a degenerate string. A degenerate string is said to be conservative if its n…
cs.DS2015
Linear-Time Superbubble Identification Algorithm for Genome Assembly
Ljiljana Brankovic, Costas S. Iliopoulos, Ritu Kundu +3
DNA sequencing is the process of determining the exact order of the nucleotide bases of an individual's genome in order to catalogue sequence variation and understand its biologica…