57 citations · 336 across the 51 of their papers we have counts for
7 papers · 1 filter
Entrainment in the Master Equation
Michael Margaliot, Lars Grüne, Thomas Kriecherbauer
The master equation plays an important role in many scientific fields including physics, chemistry, systems biology, physical finance, and sociodynamics. We consider the master equ…
A Polynomial-Time Algorithm for Solving the Minimal Observability Problem in Conjunctive Boolean Networks
Eyal Weiss, Michael Margaliot
Many complex systems in biology, physics, and engineering include a large number of state-variables, and measuring the full state of the system is often impossible. Typically, a se…
Optimal Translation Along a Circular mRNA
Yoram Zarai, Alexander Ovseevich, Michael Margaliot
The ribosome flow model on a ring (RFMR) is a deterministic model for translation of a circularized mRNA. We derive a new spectral representation for the optimal steady-state produ…
Ribosome Flow Model with Extended Objects
Yoram Zarai, Michael Margaliot, Tamir Tuller
We study a deterministic mechanistic model for the flow of ribosomes along the mRNA molecule, called the ribosome flow model with extended objects (RFMEO). This model encapsulates…
A Deterministic Model for One-Dimensional Excluded Flow with Local Interactions
Yoram Zarai, Michael Margaliot, Anatoly B. Kolomeisky
Natural phenomena frequently involve a very large number of interacting molecules moving in confined regions of space. Cellular transport by motor proteins is an example of such co…
Minimal Controllability of Conjunctive Boolean Networks is NP-Complete
Eyal Weiss, Michael Margaliot, Guy Even
Given a conjunctive Boolean network (CBN) with state-variables, we consider the problem of finding a minimal set of state-variables to directly affect with an input so that the…
Approximating the Frequency Response of Contractive Systems
Michael Margaliot, Samuel Coogan
We consider contractive systems whose trajectories evolve on a compact and convex state-space. It is well-known that if the time-varying vector field of the system is periodic then…