214 citations · 261 across the 4 of their papers we have counts for
3 papers · 1 filter
Coarse-grained modelling of strong DNA bending II: Cyclization
Ryan M. Harrison, Flavio Romano, Thomas E. Ouldridge +2
DNA cyclization is a powerful technique to gain insight into the nature of DNA bending. The worm-like chain model provides a good description of small to moderate bending fluctuati…
Coarse-grained modelling of strong DNA bending I: Thermodynamics and comparison to an experimental "molecular vice"
Ryan M. Harrison, Flavio Romano, Thomas E. Ouldridge +2
DNA bending is biologically important for genome regulation and is relevant to a range of nanotechnological systems. Recent results suggest that sharp bending is much easier than i…
Coarse-graining DNA for simulations of DNA nanotechnology
Jonathan P. K. Doye, Thomas E. Ouldridge, Ard A. Louis +8
To simulate long time and length scale processes involving DNA it is necessary to use a coarse-grained description. Here we provide an overview of different approaches to such coar…