22 citations · 25 across the 5 of their papers we have counts for
13 papers
A persistent homology-based topological loss function for multi-class CNN segmentation of cardiac MRI
Nick Byrne, James R. Clough, Giovanni Montana +1
With respect to spatial overlap, CNN-based segmentation of short axis cardiovascular magnetic resonance (CMR) images has achieved a level of performance consistent with inter obser…
Deep Learning Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation
Ilkay Oksuz, James R. Clough, Bram Ruijsink +6
Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependen…
A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology
James R. Clough, Nicholas Byrne, Ilkay Oksuz +3
We introduce a method for training neural networks to perform image or volume segmentation in which prior knowledge about the topology of the segmented object can be explicitly pro…
dAUTOMAP: decomposing AUTOMAP to achieve scalability and enhance performance
Jo Schlemper, Ilkay Oksuz, James R. Clough +5
AUTOMAP is a promising generalized reconstruction approach, however, it is not scalable and hence the practicality is limited. We present dAUTOMAP, a novel way for decomposing the…
Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging
Tong Zhang, Laurence H. Jackson, Alena Uus +5
Accurately estimating and correcting the motion artifacts are crucial for 3D image reconstruction of the abdominal and in-utero magnetic resonance imaging (MRI). The state-of-art m…
Topology-preserving augmentation for CNN-based segmentation of congenital heart defects from 3D paediatric CMR
Nick Byrne, James R. Clough, Isra Valverde +2
Patient-specific 3D printing of congenital heart anatomy demands an accurate segmentation of the thin tissue interfaces which characterise these diagnoses. Even when a label set ha…