85 citations · 214 across the 5 of their papers we have counts for
5 papers
Real sequence effects on the search dynamics of transcription factors on DNA
Maximilian Bauer, Emil S. Rasmussen, Michael A. Lomholt +1
Recent experiments show that transcription factors (TFs) indeed use the facilitated diffusion mechanism to locate their target sequences on DNA in living bacteria cells: TFs altern…
Collective dynamics effect transient subdiffusion of inert tracers in gel networks
Aljaz Godec, Maximilian Bauer, Ralf Metzler
Based on extensive Brownian dynamics simulations we study the thermally driven motion of a tracer bead in a cross-linked, dynamic gel network in the limit when the tracer bead's si…
Diffusion of finite-size particles in channels with random walls
Max Bauer, Aljaz Godec, Ralf Metzler
Diffusion of chemicals or tracer molecules through complex systems containing irregularly shaped channels is important in many applications. Most theoretical studies based on the f…
In vivo facilitated diffusion model
Max Bauer, Ralf Metzler
Under dilute in vitro conditions transcription factors rapidly locate their target sequence on DNA by using the facilitated diffusion mechanism. However, whether this strategy of a…
Directed excitation transfer in vibrating chains by external fields
Oliver Muelken, Maximilian Bauer
We study the coherent dynamics of excitations on vibrating chains. By applying an external field and matching the field strength with the oscillation frequency of the chain it is p…