2 papers
q-bio.PE2025
Adapting cluster graphs for inference of continuous trait evolution on phylogenetic networks
Benjamin Teo, Cécile Ané
Dynamic programming approaches have long been applied to fit models of univariate and multivariate trait evolution on phylogenetic trees for discrete and continuous traits, and mor…
q-bio.PE2024
Leveraging graphical model techniques to study evolution on phylogenetic networks
Benjamin Teo, Paul Bastide, Cécile Ané
The evolution of molecular and phenotypic traits is commonly modelled using Markov processes along a phylogeny. This phylogeny can be a tree, or a network if it includes reticulati…