3 papers
q-bio.QM2025
Hypergraph Representations of scRNA-seq Data for Improved Clustering with Random Walks
Wan He, Daniel I. Bolnick, Samuel V. Scarpino +1
Analysis of single-cell RNA sequencing data is often conducted through network projections such as coexpression networks, primarily due to the abundant availability of network anal…
cs.SI2025
A Survey on Hypergraph Mining: Patterns, Tools, and Generators
Geon Lee, Fanchen Bu, Tina Eliassi-Rad +1
Hypergraphs, which belong to the family of higher-order networks, are a natural and powerful choice for modeling group interactions in the real world. For example, when modeling co…
q-bio.GN2025
A Misclassification Network-Based Method for Comparative Genomic Analysis
Wan He, Tina Eliassi-Rad, Samuel V. Scarpino
Classifying genome sequences based on metadata has been an active area of research in comparative genomics for decades with many important applications across the life sciences. Es…