activity
19982009
most citedForward Flux Sampling-type schemes for simulating rare events: Efficiency analysis

247 citations · 1.4k across the 18 of their papers we have counts for

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Showing 2004Show all

11 papers · 1 filter

q-bio.MN2004

Length, Protein-Protein Interactions, and Complexity

Taison Tan, Daan Frenkel, Vishal Gupta +1

The evolutionary reason for the increase in gene length from archaea to prokaryotes to eukaryotes observed in large scale genome sequencing efforts has been unclear. We propose her…

cond-mat.mtrl-sci2004

The steady-state of heterogeneous catalysis, studied by first-principles statistical mechanics

Karsten Reuter, Daan Frenkel, Matthias Scheffler

The turn-over frequency of the catalytic oxidation of CO at RuO2(110) was calculated as function of temperature and partial pressures using ab initio statistical mechanics. The und…

cond-mat.soft2004

Modelling colloids with Baxter's adhesive hard sphere model

Mark A. Miller, Daan Frenkel

The structure of the Baxter adhesive hard sphere fluid is examined using computer simulation. The radial distribution function (which exhibits unusual discontinuities due to the pa…

cond-mat.soft2004

Homogeneous nucleation of colloidal melts under the influence of shearing fields

Ronald Blaak, Stefan Auer, Daan Frenkel +1

We study the effect of shear flow on homogeneous crystal nucleation, using Brownian Dynamics simulations in combination with an umbrella sampling like technique. The symmetry break…

cond-mat.soft2004

Crystal Nucleation of Colloidal Suspensions under Shear

Ronald Blaak, Stefan Auer, Daan Frenkel +1

We use Brownian Dynamics simulations in combination with the umbrella sampling technique to study the effect of shear flow on homogeneous crystal nucleation. We find that a homogen…

cond-mat.soft2004

Phase diagram of the adhesive hard sphere fluid

M. A. Miller, D. Frenkel

The phase behavior of the Baxter adhesive hard sphere fluid has been determined using specialized Monte Carlo simulations. We give a detailed account of the techniques used and pre…