39 citations · 322 across the 36 of their papers we have counts for
4 papers · 2 filters
Excluded volume effect enhances the homology pairing of model chromosomes
Kazunori Takamiya, Keisuke Yamamoto, Shuhei Isami +2
To investigate the structural dynamics of the homology pairing of polymers, we mod- eled the scenario of homologous chromosome pairings during meiosis in Schizosaccharomyces pombe,…
Rate equation model of phototransduction into the membranous disks of mouse rod cells
Rei Takamoto, Hiraku Nishimori, Akinori Awazu
A theoretical model was developed to investigate the rod phototransduction process in the mouse. In particular, we explored the biochemical reactions of several chemical components…
Simple Elastic Network Models for Exhaustive Analysis of Long Double-Stranded DNA Dynamics with Sequence Geometry Dependence
Shuhei Isami, Naoaki Sakamoto, Hiraku Nishimori +1
Simple elastic network models of DNA were developed to reveal the structure-dynamics relationships for several nucleotide sequences. First, we propose a simple all-atom elastic net…
Nuclear dynamical deformation induced hetero- and euchromatin positioning
Akinori Awazu
The contributions of active deformation dynamics in cell nuclei to the intra-nuclear positioning of hetero- and euchromatin are investigated. We analyzed the behaviors of model cha…