253 citations · 520 across the 24 of their papers we have counts for
3 papers · 1 filter
Information Flow in Interaction Networks
Aleksandar Stojmirović, Yi-Kuo Yu
Interaction networks, consisting of agents linked by their interactions, are ubiquitous across many disciplines of modern science. Many methods of analysis of interaction networks…
CytoITMprobe: a network information flow plugin for Cytoscape
Aleksandar Stojmirović, Alexander Bliskovsky, Yi-Kuo Yu
To provide the Cytoscape users the possibility of integrating ITM Probe into their workflows, we developed CytoITMprobe, a new Cytoscape plugin. CytoITMprobe maintains all the desi…
ppiTrim: Constructing non-redundant and up-to-date interactomes
Aleksandar Stojmirović, Yi-Kuo Yu
Robust advances in interactome analysis demand comprehensive, non-redundant and consistently annotated datasets. By non-redundant, we mean that the accounting of evidence for every…