102 citations · 258 across the 5 of their papers we have counts for
5 papers
Kinetic Monte Carlo and Cellular Particle Dynamics Simulations of Multicellular Systems
Elijah Flenner, Lorant Janosi, Bogdan Barz +3
Computer modeling of multicellular systems has been a valuable tool for interpreting and guiding in vitro experiments relevant to embryonic morphogenesis, tumor growth, angiogenesi…
Calculating free energy profiles in biomolecular systems from fast non-equilibrium processes
Michael Forney, Lorant Janosi, Ioan Kosztin
Often gaining insight into the functioning of biomolecular systems requires to follow their dynamics along a microscopic reaction coordinate (RC) on a macroscopic time scale, which…
Theoretical prediction of spectral and optical properties of bacteriochlorophylls in thermally disordered LH2 antenna complexes
Lorant Janosi, Ioan Kosztin, Ana Damjanovic
A general approach for calculating spectral and optical properties of pigment-protein complexes of known atomic structure is presented. The method, that combines molecular dynamics…
Calculating potentials of mean force and diffusion coefficients from nonequilibirum processes without Jarzynski's equality
Ioan Kosztin, Bogdan Barz, Lorant Janosi
In general, the direct application of the Jarzynski equality (JE) to reconstruct potentials of mean force (PMFs) from a small number of nonequilibrium unidirectional steered molecu…
Influence of subunit structure on the oligomerization state of light harvesting complexes: a free energy calculation study
Lorant Janosi, Harindar Keer, Ioan Kosztin +1
Light harvesting complexes 2 (LH2) from Rhodospirillum (Rs.) molischianum and Rhodopseudomonas (Rps.) acidophila form ring complexes out of eight or nine identical subunits, respec…