3 papers
q-bio.QM2026
scMRDR: A scalable and flexible framework for unpaired single-cell multi-omics data integration
Jianle Sun, Chaoqi Liang, Ran Wei +5
Advances in single-cell sequencing have enabled high-resolution profiling of diverse molecular modalities, while integrating unpaired multi-omics single-cell data remains challengi…
q-bio.QM2024
BEACON: Benchmark for Comprehensive RNA Tasks and Language Models
Yuchen Ren, Zhiyuan Chen, Lifeng Qiao +10
RNA plays a pivotal role in translating genetic instructions into functional outcomes, underscoring its importance in biological processes and disease mechanisms. Despite the emerg…
cs.AI2024
Toward Understanding BERT-Like Pre-Training for DNA Foundation Models
Chaoqi Liang, Lifeng Qiao, Peng Ye +9
With the success of large-scale pre-training in language tasks, there is an increasing trend of applying it to the domain of life sciences. In particular, pre-training methods base…