118 citations · 243 across the 18 of their papers we have counts for
13 papers · 1 filter
Simulating the collapse transition of a two-dimensional semiflexible lattice polymer
Jie Zhou, Zhong-Can Ou-Yang, Haijun Zhou
It has been revealed by mean-field theories and computer simulations that the nature of the collapse transition of a polymer is influenced by its bending stiffness . In…
Bayesian analysis of time series of single RNA under fluctuating force
Fei Liu, Zhong-can Ou-Yang
Extracting the intrinsic kinetic information of biological molecule from its single-molecule kinetic data is of considerable biophysical interest. In this work, we theoretically in…
Collapse Transition of Two-Dimensional Flexible and Semiflexible Polymers
Haijun Zhou, Jie Zhou, Zhong-Can Ou-Yang +1
The nature of the globule-coil transition of surface-confined polymers has been an issue of debate. Here this 2D collapse transition is studied through a partially directed lattice…
Driven translocation of a polynucleotide chain through a nanopore--A continuous time Monte-Carlo study
Pui-Man Lam, Fei Liu, Zhong-can OuYang
Using continuous time Monte-Carlo method we simulated the translocation of a polynucleotide chain driven through a nanopore by an electric field. We have used two models of driven…
Stochastic dynamics of adhesion catch-slip bond cluster
Fei Liu, Zhong-can Ou-Yang
We present a general stochastic dynamic model of a cluster of biological complexes with fluctuating dissociation and association rates. The master equation has analytical solutions…
Bell Rate Model with Dynamic Disorder: Model and Its Application in the Receptor-ligand Forced Dissociation Experiments
Fei Liu, Zhong-can Ou-Yang
We extend the Bell forced dissociation rate model to take account into dynamic disorder. The motivation of the present work is from the recent forced dissociation experiments of th…