2 papers
q-bio.BM2026
Minimal-Action Discrete Schrödinger Bridge Matching for Peptide Sequence Design
Shrey Goel, Pranam Chatterjee
Generative modeling of peptide sequences requires navigating a discrete and highly constrained space in which many intermediate states are chemically implausible or unstable. Exist…
q-bio.BM2025
Token-Level Guided Discrete Diffusion for Membrane Protein Design
Shrey Goel, Peregrine M. Schray, Yinuo Zhang +3
Reparameterized diffusion models (RDMs) have recently matched autoregressive methods in protein generation, motivating their use for challenging tasks such as designing membrane pr…