3 papers
q-bio.NC2026
Discovering Mechanistic Models of Neural Activity: System Identification in an in Silico Zebrafish
Jan-Matthis Lueckmann, Viren Jain, MichaÅ Januszewski
Constructing mechanistic models of neural circuits is a fundamental goal of neuroscience, yet verifying such models is limited by the lack of ground truth. To rigorously test model…
q-bio.NC2025
ZAPBench: A Benchmark for Whole-Brain Activity Prediction in Zebrafish
Jan-Matthis Lueckmann, Alexander Immer, Alex Bo-Yuan Chen +15
Data-driven benchmarks have led to significant progress in key scientific modeling domains including weather and structural biology. Here, we introduce the Zebrafish Activity Predi…
cs.CV2025
Forecasting Whole-Brain Neuronal Activity from Volumetric Video
Alexander Immer, Jan-Matthis Lueckmann, Alex Bo-Yuan Chen +14
Large-scale neuronal activity recordings with fluorescent calcium indicators are increasingly common, yielding high-resolution 2D or 3D videos. Traditional analysis pipelines reduc…