37 citations · 38 across the 2 of their papers we have counts for
3 papers
Redesigning GROMACS Halo Exchange: Improving Strong Scaling with GPU-initiated NVSHMEM
Mahesh Doijade, Andrey Alekseenko, Ania Brown +2
Improving time-to-solution in molecular dynamics simulations often requires strong scaling due to fixed-sized problems. GROMACS is highly latency-sensitive, with peak iteration rat…
Derivation, calibration and verification of macroscopic model for urban traffic flow. Part 2
Andrey E. Alekseenko, Yaroslav A. Kholodov, Aleksandr S. Kholodov +4
In this paper, we propose a unified procedure for calibration of macroscopic second-order multilane traffic models. The focus is on calibrating the fundamental diagram using the co…
Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrin
Olga Kononova, Rustem I. Litvinov, Artem Zhmurov +6
Polymerization of fibrin, the primary structural protein of blood clots and thrombi, occurs through binding of knobs 'A' and 'B' in the central nodule of fibrin monomer to compleme…