3 papers
q-bio.OT2026
Omnibenchmark: transparent, reproducible, extensible and standardized orchestration of solo and collaborative benchmarks
Izaskun Mallona, Almut Luetge, Ben Carrillo +6
Benchmarking involves designing, running and disseminating rigorous performance assessments of methods, most often for data analysis and software tools, but the process can also be…
q-bio.OT2025
Building a continuous benchmarking ecosystem in bioinformatics
Izaskun Mallona, Charlotte Soneson, Ben Carrillo +5
Benchmarking, which involves collecting reference datasets and demonstrating method performances, is a requirement for the development of new computational tools, but also becomes…
cs.CY2025
Learning and teaching biological data science in the Bioconductor community
Jenny Drnevich, Frederick J. Tan, Fabricio Almeida-Silva +15
Modern biological research is increasingly data-intensive, leading to a growing demand for effective training in biological data science. In this article, we provide an overview of…