2 citations · 2 across the 3 of their papers we have counts for
3 papers
An application of topological graph clustering to protein function prediction
R. Sean Bowman, Douglas Heisterkamp, Jesse Johnson +1
We use a semisupervised learning algorithm based on a topological data analysis approach to assign functional categories to yeast proteins using similarity graphs. This new approac…
Thin Tree Position
R. Sean Bowman, Douglas R. Heisterkamp, Jesse Johnson
We introduce a method for creating a special type of tree, called a tree position, from a weighted graph. Leaves of the tree correspond to vertices of the original graph, and the t…
Bridge spectra of twisted torus knots
R. Sean Bowman, Scott Taylor, Alex Zupan
We compute the genus zero bridge numbers and give lower bounds on the genus one bridge numbers for a large class of sufficiently generic hyperbolic twisted torus knots. As a result…