activity
20122025
most citedMedAlpaca -- An Open-Source Collection of Medical Conversational AI Models and Training Data

109 citations · 188 across the 7 of their papers we have counts for

collaborators

8 papers

cs.CL2025

"Where does it hurt?" -- Dataset and Study on Physician Intent Trajectories in Doctor Patient Dialogues

Tom Röhr, Soumyadeep Roy, Fares Al Mohamad +4

In a doctor-patient dialogue, the primary objective of physicians is to diagnose patients and propose a treatment plan. Medical doctors guide these conversations through targeted q…

cs.CL2024★ 10 cited

Generalist embedding models are better at short-context clinical semantic search than specialized embedding models

Jean-Baptiste Excoffier, Tom Roehr, Alexei Figueroa +3

The increasing use of tools and solutions based on Large Language Models (LLMs) for various tasks in the medical domain has become a prominent trend. Their use in this highly criti…

cs.CL2023★ 109 cited

MedAlpaca -- An Open-Source Collection of Medical Conversational AI Models and Training Data

Tianyu Han, Lisa C. Adams, Jens-Michalis Papaioannou +6

As large language models (LLMs) like OpenAI's GPT series continue to make strides, we witness the emergence of artificial intelligence applications in an ever-expanding range of fi…

cs.CL2023★ 52 cited

MEDBERT.de: A Comprehensive German BERT Model for the Medical Domain

Keno K. Bressem, Jens-Michalis Papaioannou, Paul Grundmann +12

This paper presents medBERTde, a pre-trained German BERT model specifically designed for the German medical domain. The model has been trained on a large corpus of 4.7 Million Germ…

cs.CL2022★ 6 cited

This Patient Looks Like That Patient: Prototypical Networks for Interpretable Diagnosis Prediction from Clinical Text

Betty van Aken, Jens-Michalis Papaioannou, Marcel G. Naik +4

The use of deep neural models for diagnosis prediction from clinical text has shown promising results. However, in clinical practice such models must not only be accurate, but prov…

cs.CL2022

Cross-Lingual Knowledge Transfer for Clinical Phenotyping

Jens-Michalis Papaioannou, Paul Grundmann, Betty van Aken +5

Clinical phenotyping enables the automatic extraction of clinical conditions from patient records, which can be beneficial to doctors and clinics worldwide. However, current state-…

cs.CL2021★ 2 cited

Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration

Betty van Aken, Jens-Michalis Papaioannou, Manuel Mayrdorfer +3

Outcome prediction from clinical text can prevent doctors from overlooking possible risks and help hospitals to plan capacities. We simulate patients at admission time, when decisi…

cs.LG2012★ 9 cited

Canonical Trends: Detecting Trend Setters in Web Data

Felix Biessmann, Jens-Michalis Papaioannou, Mikio Braun +1

Much information available on the web is copied, reused or rephrased. The phenomenon that multiple web sources pick up certain information is often called trend. A central problem…