activity
20122022
most citedSimultaneous identification of specifically interacting paralogs and inter-protein contacts by Direct-Coupling Analysis

148 citations · 493 across the 13 of their papers we have counts for

collaborators

13 papers

cs.CL2022

Knowledge Distillation Transfer Sets and their Impact on Downstream NLU Tasks

Charith Peris, Lizhen Tan, Thomas Gueudre +3

Teacher-student knowledge distillation is a popular technique for compressing today's prevailing large language models into manageable sizes that fit low-latency downstream applica…

cs.CL2022★ 64 cited

Alexa Teacher Model: Pretraining and Distilling Multi-Billion-Parameter Encoders for Natural Language Understanding Systems

Jack FitzGerald, Shankar Ananthakrishnan, Konstantine Arkoudas +38

We present results from a large-scale experiment on pretraining encoders with non-embedding parameter counts ranging from 700M to 9.3B, their subsequent distillation into smaller m…

q-bio.PE2018★ 22 cited

Exploration-exploitation tradeoffs dictate the optimal distributions of phenotypes for populations subject to fitness fluctuations

Andrea De Martino, Thomas Gueudré, Mattia Miotto

We study a minimal model for the growth of a phenotypically heterogeneous population of cells subject to a fluctuating environment in which they can replicate (by exploiting availa…

q-bio.PE2016★ 2 cited

Growth over time-correlated disorder: a spectral approach to Mean-field

Thomas Gueudré

We generalize a model of growth over a disordered environment, to a large class of Itō processes. In particular, we study how the microscopic properties of the noise influence the…

cond-mat.soft2016★ 1 cited

Scaling Description of Non-Local Rheology

Thomas Gueudré, Jie Lin, Alberto Rosso +1

Non-locality is crucial to understand the plastic flow of an amorphous material, and has been successfully described by the fluidity, along with a cooperativity length scale ξ. We…

q-bio.QM2016★ 148 cited

Simultaneous identification of specifically interacting paralogs and inter-protein contacts by Direct-Coupling Analysis

Thomas Gueudré, Carlo Baldassi, Marco Zamparo +2

Understanding protein-protein interactions is central to our understanding of almost all complex biological processes. Computational tools exploiting rapidly growing genomic databa…

cond-mat.soft2015★ 84 cited

Criticality in the approach to failure in amorphous solids

Jie Lin, Thomas Gueudré, Alberto Rosso +1

Failure of amorphous solids is fundamental to various phenomena, including landslides and earthquakes. Recent experiments indicate that highly plastic regions form elongated struct…

cond-mat.dis-nn2014★ 21 cited

Revisiting Directed Polymers with heavy-tailed disorder

Thomas Gueudré, Pierre Le Doussal, Jean-Philippe Bouchaud +1

In this mostly numerical study, we revisit the statistical properties of the ground state of a directed polymer in a "hilly" disorder landscape, i.e. when the quenched diso…

cond-mat.dis-nn2014★ 5 cited

Strong pinning of propagation fronts in adverse flow

Thomas Gueudré, Awadhesh Kumar Dubey, Laurent Talon +1

Reaction fronts evolving in a porous medium exhibit a rich dynamical behaviour. In presence of an adverse flow, experiments show that the front slows down and eventually gets pinne…

cond-mat.dis-nn2013★ 1 cited

Statistics of shocks in a toy model with heavy tails

Thomas Gueudré, Pierre Le Doussal

We study the energy minimization for a particle in a quadratic well in presence of short-ranged heavy-tailed disorder, as a toy model for an elastic manifold. The discrete model is…

cond-mat.dis-nn2013★ 33 cited

Explore or exploit? A generic model and an exactly solvable case

Thomas Gueudré, Alexander Dobrinevski, Jean-Philippe Bouchaud

Finding a good compromise between the exploitation of known resources and the exploration of unknown, but potentially more profitable choices, is a general problem, which arises in…

cond-mat.dis-nn2012★ 80 cited

Directed polymer near a hard wall and KPZ equation in the half-space

Thomas Gueudre, Pierre Le Doussal

We study the directed polymer with fixed endpoints near an absorbing wall, in the continuum and in presence of disorder, equivalent to the KPZ equation on the half space with dropl…

cond-mat.stat-mech2012★ 32 cited

Short time growth of a KPZ interface with flat initial conditions

Thomas Gueudre, Pierre Le Doussal, Alberto Rosso +2

The short time behavior of the 1+1 dimensional KPZ growth equation with a flat initial condition is obtained from the exact expressions of the moments of the partition function of…