63 citations · 202 across the 28 of their papers we have counts for
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q-bio.QM2012★ 2 cited
SASeq: A Selective and Adaptive Shrinkage Approach to Detect and Quantify Active Transcripts using RNA-Seq
Tin Chi Nguyen, Nan Deng, Dongxiao Zhu
Identification and quantification of condition-specific transcripts using RNA-Seq is vital in transcriptomics research. While initial efforts using mathematical or statistical mode…
q-bio.QM2011★ 2 cited
GSGS: A Computational Framework to Reconstruct Signaling Pathways from Gene Sets
Lipi Acharya, Thair Judeh, Zhansheng Duan +2
We propose a novel two-stage Gene Set Gibbs Sampling (GSGS) framework, to reverse engineer signaling pathways from gene sets inferred from molecular profiling data. We hypothesize…