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19982023
most citedApproximation and inference methods for stochastic biochemical kinetics - a tutorial review

341 citations · 860 across the 36 of their papers we have counts for

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7 papers · 1 filter

stat.ML2023★ 1 cited

Attacks on Online Learners: a Teacher-Student Analysis

Riccardo Giuseppe Margiotta, Sebastian Goldt, Guido Sanguinetti

Machine learning models are famously vulnerable to adversarial attacks: small ad-hoc perturbations of the data that can catastrophically alter the model predictions. While a large…

stat.ML2016

Matching models across abstraction levels with Gaussian Processes

Giulio Caravagna, Luca Bortolussi, Guido Sanguinetti

Biological systems are often modelled at different levels of abstraction depending on the particular aims/resources of a study. Such different models often provide qualitatively co…

stat.ML2015★ 9 cited

Expectation propagation for continuous time stochastic processes

Botond Cseke, David Schnoerr, Manfred Opper +1

We consider the inverse problem of reconstructing the posterior measure over the trajec- tories of a diffusion process from discrete time observations and continuous time constrain…

stat.ML2015★ 1 cited

Unbiased Bayesian Inference for Population Markov Jump Processes via Random Truncations

Anastasis Georgoulas, Jane Hillston, Guido Sanguinetti

We consider continuous time Markovian processes where populations of individual agents interact stochastically according to kinetic rules. Despite the increasing prominence of such…

stat.ML2015

A Bayesian approach for structure learning in oscillating regulatory networks

D Trejo, AJ Millar, G Sanguinetti

Oscillations lie at the core of many biological processes, from the cell cycle, to circadian oscillations and developmental processes. Time-keeping mechanisms are essential to enab…

stat.ML2013

Factored expectation propagation for input-output FHMM models in systems biology

Botond Cseke, Guido Sanguinetti

We consider the problem of joint modelling of metabolic signals and gene expression in systems biology applications. We propose an approach based on input-output factorial hidden M…

stat.ML2013

Sparse Approximate Inference for Spatio-Temporal Point Process Models

Botond Cseke, Andrew Zammit Mangion, Tom Heskes +1

Spatio-temporal point process models play a central role in the analysis of spatially distributed systems in several disciplines. Yet, scalable inference remains computa- tionally…