2 papers
q-bio.QM2026
Regressor-guided Diffusion Model for De Novo Peptide Sequencing with Explicit Mass Control
Shaorong Chen, Jingbo Zhou, Jun Xia
The discovery of novel proteins relies on sensitive protein identification, for which de novo peptide sequencing (DNPS) from mass spectra is a crucial approach. While deep learning…
q-bio.QM2024
NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics
Jingbo Zhou, Shaorong Chen, Jun Xia +6
Tandem mass spectrometry has played a pivotal role in advancing proteomics, enabling the high-throughput analysis of protein composition in biological tissues. Many deep learning m…