419 citations · 832 across the 30 of their papers we have counts for
9 papers · 1 filter
Multilayer flows in molecular networks identify biological modules in the human proteome
Giuseppe Mangioni, Giuseppe Jurman, Manlio De Domenico
A variety of complex systems exhibit different types of relationships simultaneously that can be modeled by multiplex networks. A typical problem is to determine the community stru…
Differential network analysis and graph classification: a glocal approach
Giuseppe Jurman, Michele Filosi, Samantha Riccadonna +2
Based on the glocal HIM metric and its induced graph kernel, we propose a novel solution in differential network analysis that integrates network comparison and classification task…
DTW-MIC Coexpression Networks from Time-Course Data
Samantha Riccadonna, Giuseppe Jurman, Roberto Visintainer +2
When modeling coexpression networks from high-throughput time course data, Pearson Correlation Coefficient (PCC) is one of the most effective and popular similarity functions. Howe…
Stability Indicators in Network Reconstruction
Giuseppe Jurman, Michele Filosi, Roberto Visintainer +2
The number of algorithms available to reconstruct a biological network from a dataset of high-throughput measurements is nowadays overwhelming, but evaluating their performance whe…
Evaluating sources of variability in pathway profiling
A. Barla, S. Riccadonna, S. Masecchia +4
A bioinformatics platform is introduced aimed at identifying models of disease-specific pathways, as well as a set of network measures that can quantify changes in terms of global…
Biological network comparison via Ipsen-Mikhailov distance
Giuseppe Jurman, Samantha Riccadonna, Roberto Visintainer +1
Highlighting similarities and differences between networks is an informative task in investigating many biological processes. Typical examples are detecting differences between an…