269 citations · 344 across the 9 of their papers we have counts for
3 papers · 1 filter
Probabilistic Models of k-mer Frequencies (Extended Abstract)
Askar Gafurov, Tomáš Vinař, Broňa Brejová
In this article, we review existing probabilistic models for modeling abundance of fixed-length strings (k-mers) in DNA sequencing data. These models capture dependence of the abun…
Dynamic Pooling Improves Nanopore Base Calling Accuracy
Vladimír Boža, Peter Perešíni, Broňa Brejová +1
In nanopore sequencing, electrical signal is measured as DNA molecules pass through the sequencing pores. Translating these signals into DNA bases (base calling) is a highly non-tr…
B.1.258, a SARS-CoV-2 variant with H69/V70 in the Spike protein circulating in the Czech Republic and Slovakia
Broňa Brejová, Viktória Hodorová, Kristína Boršová +7
SARS-CoV-2 mutants carrying the H69/V70 deletion in the amino terminal domain of the Spike protein emerged independently in at least six lineages of the virus (namely, B.1.1.…