79 citations · 164 across the 20 of their papers we have counts for
3 papers · 1 filter
An adjacent-swap Markov chain on coalescent trees
Mackenzie Simper, Julia A. Palacios
The standard coalescent is widely used in evolutionary biology and population genetics to model the ancestral history of a sample of molecular sequences as a rooted and ranked bina…
Adaptive preferential sampling in phylodynamics
Lorenzo Cappello, Julia A. Palacios
Longitudinal molecular data of rapidly evolving viruses and pathogens provide information about disease spread and complement traditional surveillance approaches based on case coun…
The Tajima heterochronous n-coalescent: inference from heterochronously sampled molecular data
Lorenzo Cappello, Amandine Veber, Julia A. Palacios
The observed sequence variation at a locus informs about the evolutionary history of the sample and past population size dynamics. The Kingman coalescent is used in a generative mo…