activity
20102024
most citedInferring gene regulatory networks from single-cell data: a mechanistic approach

103 citations · 136 across the 10 of their papers we have counts for

collaborators

13 papers

stat.ME2024

Spatio-temporal point process intensity estimation using zero-deflated subsampling applied to a lightning strikes dataset in France

Jean-François Coeurjolly, Thibault Espinasse, Anne-Laure Fougères +1

Cloud-to-ground lightning strikes observed in a specific geographical domain over time can be naturally modeled by a spatio-temporal point process. Our focus lies in the parametric…

math.PR2022★ 3 cited

A Probabilistic Graph Coupling View of Dimension Reduction

Hugues Van Assel, Thibault Espinasse, Julien Chiquet +1

Most popular dimension reduction (DR) methods like t-SNE and UMAP are based on minimizing a cost between input and latent pairwise similarities. Though widely used, these approache…

math.CO2019

A coupling of the spectral measures at a vertex

Thibault Espinasse, Paul Rochet

Given the adjacency matrix of an undirected graph, we define a coupling of the spectral measures at the vertices, whose moments count the rooted closed paths in the graph. The resu…

q-bio.MN2017★ 103 cited

Inferring gene regulatory networks from single-cell data: a mechanistic approach

Ulysse Herbach, Arnaud Bonnaffoux, Thibault Espinasse +1

The recent development of single-cell transcriptomics has enabled gene expression to be measured in individual cells instead of being population-averaged. Despite this considerable…

math.ST2016★ 7 cited

Reconstructing undirected graphs from eigenspaces

Yohann De Castro, Thibault Espinasse, Paul Rochet

In this paper, we aim at recovering an undirected weighted graph of vertices from the knowledge of a perturbed version of the eigenspaces of its adjacency matrix . For insta…

math.CO2015★ 1 cited

Relations between connected and self-avoiding walks in a digraph

Thibault Espinasse, Paul Rochet

Walks in a directed graph can be given a partially ordered structure that extends to possibly unconnected objects, called hikes. Studying the incidence algebra on this poset reveal…