118 citations · 528 across the 31 of their papers we have counts for
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Stochastic focusing coupled with negative feedback enables robust regulation in biochemical reaction networks
Andreas Milias-Argeitis, Stefan Engblom, Pavol Bauer +1
Nature presents multiple intriguing examples of processes which proceed at high precision and regularity. This remarkable stability is frequently counter to modelers' experience wi…
Mesoscopic modeling of stochastic reaction-diffusion kinetics in the subdiffusive regime
Emilie Blanc, Stefan Engblom, Andreas Hellander +1
Subdiffusion has been proposed as an explanation of various kinetic phenomena inside living cells. In order to fascilitate large-scale computational studies of subdiffusive chemica…
Analysis and design of jump coefficients in discrete stochastic diffusion models
Lina Meinecke, Stefan Engblom, Andreas Hellander +1
In computational system biology, the mesoscopic model of reaction-diffusion kinetics is described by a continuous time, discrete space Markov process. To simulate diffusion stochas…
Fast event-based epidemiological simulations on national scales
Pavol Bauer, Stefan Engblom, Stefan Widgren
We present a computational modeling framework for data-driven simulations and analysis of infectious disease spread in large populations. For the purpose of efficient simulations,…