activity
20122026
most citedMolecular mechanisms that regulate the coupled period of the mammalian circadian clock

48 citations · 94 across the 36 of their papers we have counts for

collaborators

48 papers

q-bio.PE2026

Social Discounting Enables Fast and Reliable Collective Escape

Zachary P Kilpatrick

Solitary animals face a tradeoff when detecting threats: faster detection means accepting more false alarms. We show that groups can manage this tradeoff better by treating an undi…

q-bio.NC2026

Resource depletion accelerates rate learning but not composition learning in patch foraging

Zachary P. Kilpatrick, Ahmed El Hady

Foraging is a universal animal behavior that has increasingly attracted the interest of both experimentalists and theorists. Most prior models assume an animal knows the distributi…

q-bio.NC2026

Astrocytic resource diffusion stabilizes persistent activity in neural fields

Noah Palmer, Heather L. Cihak, Daniele Avitabile +1

Persistent neural activity underlying working memory requires sustained synaptic transmission, yet the metabolic and neurotransmitter support provided by astrocyte networks is larg…

physics.soc-ph2026

Modularity, asymmetry, and polarization shape consensus speed in the voter model

Madi Yerlanov, Zachary Kilpatrick, Nancy Rodriguez

In populations with community structure, the formation of consensus requires both alignment within and diffusion of beliefs across groups, processes that evolve on distinct time sc…

q-bio.NC2026

Stroboscopic motion reversals in delay-coupled neural fields

Noah Parks, Zachary P Kilpatrick

Visual illusions provide a window into the mechanisms underlying visual processing, and dynamical neural circuit models offer a natural framework for proposing and testing theories…

math.HO2025

Modeling Social Systems: Transparency, Reproducibility, and Responsibility

Maximino Aldana, Roni Barak Ventura, Heather Z. Brooks +13

Mathematical models of complex social systems can enrich social scientific theory, inform interventions, and shape policy. From voting behavior to economic inequality and urban dev…

math.NA2025

Radial Basis Function Techniques for Neural Field Models on Surfaces

Sage B Shaw, Zachary P Kilpatrick, Daniele Avitabile

We present a numerical framework for solving neural field equations on surfaces using Radial Basis Function (RBF) interpolation and quadrature. Neural field models describe the evo…

cs.AI2025

Information-Seeking Decision Strategies Mitigate Risk in Dynamic, Uncertain Environments

Nicholas W. Barendregt, Joshua I. Gold, Krešimir Josić +1

To survive in dynamic and uncertain environments, individuals must develop effective decision strategies that balance information gathering and decision commitment. Models of such…

q-bio.NC2024

Robustly encoding certainty in a metastable neural circuit model

Heather L Cihak, Zachary P Kilpatrick

Localized persistent neural activity can encode delayed estimates of continuous variables. Common experiments require that subjects store and report the feature value (e.g., orient…

physics.soc-ph2024★ 1 cited

Fast decisions reflect biases, slow decisions do not

Samantha Linn, Sean D. Lawley, Bhargav R. Karamched +2

Decisions are often made by heterogeneous groups of individuals, each with distinct initial biases and access to information of different quality. We show that in large groups of i…

q-bio.NC2023

Representing stimulus motion with waves in adaptive neural fields

Sage Shaw, Zachary P Kilpatrick

Traveling waves of neural activity emerge in cortical networks both spontaneously and in response to stimuli. The spatiotemporal structure of waves can indicate the information the…

q-bio.NC2023★ 1 cited

Multiscale motion and deformation of bumps in stochastic neural fields with dynamic connectivity

Heather L Cihak, Zachary P Kilpatrick

The distinct timescales of synaptic plasticity and neural activity dynamics play an important role in the brain's learning and memory systems. Activity-dependent plasticity reshape…

physics.soc-ph2023

Correlated Information Reduces Accuracy of Pioneering Decision-Makers

Megan Stickler, William Ott, Zachary P. Kilpatrick +2

Normative models are often used to describe how humans and animals make decisions. These models treat deliberation as the accumulation of uncertain evidence that terminates with a…

stat.ME2022

Adaptive Bayesian Inference of Markov Transition Rates

Nicholas W. Barendregt, Emily G. Webb, Zachary P. Kilpatrick

Optimal designs minimize the number of experimental runs (samples) needed to accurately estimate model parameters, resulting in algorithms that, for instance, efficiently minimize…

q-bio.NC2022

Distinct excitatory and inhibitory bump wandering in a stochastic neural field

Heather L Cihak, Tahra L Eissa, Zachary P Kilpatrick

Localized persistent cortical neural activity is a validated neural substrate of parametric working memory. Such activity `bumps' represent the continuous location of a cue over se…

q-bio.PE2022

Stochastic dynamics of social patch foraging decisions

Subekshya Bidari, Ahmed El Hady, Jacob Davidson +1

Animals typically forage in groups. Social foraging can help animals avoid predation and decrease their uncertainty about the richness of food resources. Despite this, theoretical…

q-bio.PE2020

Hive geometry shapes the recruitment rate of honeybee colonies

Subekshya Bidari, Zachary P Kilpatrick

Honey bees make decisions regarding foraging and nest-site selection in groups ranging from hundreds to thousands of individuals. To effectively make these decisions bees need to c…

q-bio.NC2020

Normative theory of patch foraging decisions

Zachary P Kilpatrick, Jacob D Davidson, Ahmed El Hady

Foraging is a fundamental behavior as animals' search for food is crucial for their survival. Patch leaving is a canonical foraging behavior, but classic theoretical conceptions of…

q-bio.PE2019

Social inhibition maintains adaptivity and consensus of foraging honeybee swarms in dynamic environments

Subekshya Bidari, Orit Peleg, Zachary P Kilpatrick

To effectively forage in natural environments, organisms must adapt to changes in the quality and yield of food sources across multiple timescales. Individuals foraging in groups a…

q-bio.NC2019

Analyzing dynamic decision-making models using Chapman-Kolmogorov equations

Nicholas W. Barendregt, Krešimir Josić, Zachary P. Kilpatrick

Decision-making in dynamic environments typically requires adaptive evidence accumulation that weights new evidence more heavily than old observations. Recent experimental studies…

q-bio.NC2019

Performance of normative and approximate evidence accumulation on the dynamic clicks task

Adrian E. Radillo, Alan Veliz-Cuba, Krešimir Josić +1

The aim of a number of psychophysics tasks is to uncover how mammals make decisions in a world that is in flux. Here we examine the characteristics of ideal and near-ideal observer…

q-bio.NC2018

Optimal models of decision-making in dynamic environments

Zachary P. Kilpatrick, William R. Holmes, Tahra L. Eissa +1

Nature is in constant flux, so animals must account for changes in their environment when making decisions. How animals learn the timescale of such changes and adapt their decision…

physics.soc-ph2018

Bayesian Evidence Accumulation on Social Networks

Bhargav Karamched, Simon Stolarczyk, Zachary Kilpatrick +1

To make decisions we are guided by the evidence we collect, as well as the opinions of friends and neighbors. How do we integrate our private beliefs with information we obtain fro…

q-bio.PE2018★ 3 cited

Optimizing a jump-diffusion model of a starving forager

Nikhil Krishnan, Zachary P. Kilpatrick

We analyze the movement of a starving forager on a one-dimensional periodic lattice, where each location contains one unit of food. As the forager lands on sites with food, it cons…