3 papers
cs.CL2026
Large Language Models in Bioinformatics: A Survey
Zhenyu Wang, Zikang Wang, Jiyue Jiang +3
Large Language Models (LLMs) are revolutionizing bioinformatics, enabling advanced analysis of DNA, RNA, proteins, and single-cell data. This survey provides a systematic review of…
cs.CL2025
DS-ProGen: A Dual-Structure Deep Language Model for Functional Protein Design
Yanting Li, Jiyue Jiang, Zikang Wang +11
Inverse Protein Folding (IPF) is a critical subtask in the field of protein design, aiming to engineer amino acid sequences capable of folding correctly into a specified three-dime…
cs.CL2025
Benchmarking Large Language Models on Multiple Tasks in Bioinformatics NLP with Prompting
Jiyue Jiang, Pengan Chen, Jiuming Wang +13
Large language models (LLMs) have become important tools in solving biological problems, offering improvements in accuracy and adaptability over conventional methods. Several bench…