113 citations · 265 across the 10 of their papers we have counts for
10 papers
Container solutions for HPC Systems: A Case Study of Using Shifter on Blue Waters
Maxim Belkin, Roland Haas, Galen Wesley Arnold +4
Software container solutions have revolutionized application development approaches by enabling lightweight platform abstractions within the so-called "containers." Several solutio…
BOSS-LDG: A Novel Computational Framework that Brings Together Blue Waters, Open Science Grid, Shifter and the LIGO Data Grid to Accelerate Gravitational Wave Discovery
E. A. Huerta, Roland Haas, Edgar Fajardo +9
We present a novel computational framework that connects Blue Waters, the NSF-supported, leadership-class supercomputer operated by NCSA, to the Laser Interferometer Gravitational-…
Edge N-Level Sparse Visibility Graphs: Fast Optimal Any-Angle Pathfinding Using Hierarchical Taut Paths
Shunhao Oh, Hon Wai Leong
In the Any-Angle Pathfinding problem, the goal is to find the shortest path between a pair of vertices on a uniform square grid, that is not constrained to any fixed number of poss…
Parameterized Algorithms for Clustering PPI Networks
Sriganesh Srihari, Hon Wai Leong
With the advent of high-throughput wet lab technologies the amount of protein interaction data available publicly has increased substantially, in turn spurring a plethora of comput…
Evolution and Controllability of Cancer Networks: a Boolean Perspective
Sriganesh Srihari, Venkatesh Raman, Hon Wai Leong +1
Cancer forms a robust system and progresses as stages over time typically with increasing aggressiveness and worsening prognosis. Characterizing these stages and identifying the ge…
Identifying conserved protein complexes between species by constructing interolog networks
Phi Vu Nguyen, Sriganesh Srihari, Hon Wai Leong
Protein complexes conserved across species indicate processes that are core to cellular machinery (e.g. cell-cycle or DNA damage-repair complexes conserved across human and yeast).…