2 papers
q-bio.BM2013
The RNA Newton Polytope and Learnability of Energy Parameters
Elmirasadat Forouzmand, Hamidreza Chitsaz
Despite nearly two scores of research on RNA secondary structure and RNA-RNA interaction prediction, the accuracy of the state-of-the-art algorithms are still far from satisfactory…
q-bio.BM2013
An Efficient Algorithm for Upper Bound on the Partition Function of Nucleic Acids
Hamidreza Chitsaz, Elmirasadat Forouzmand, Gholamreza Haffari
It has been shown that minimum free energy structure for RNAs and RNA-RNA interaction is often incorrect due to inaccuracies in the energy parameters and inherent limitations of th…