170 citations · 3k across the 103 of their papers we have counts for
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Stochastic dynamics of model proteins on a directed graph
L. Bongini, L. Casetti, R. Livi +2
A method for reconstructing the energy landscape of simple polypeptidic chains is described. We show that we can construct an equivalent representation of the energy landscape by a…
Changing the mechanical unfolding pathway of FnIII10 by tuning the pulling strength
Simon Mitternacht, Stefano Luccioli, Alessandro Torcini +2
We investigate the mechanical unfolding of the tenth type III domain from fibronectin, FnIII10, both at constant force and at constant pulling velocity, by all-atom Monte Carlo sim…
Free energy landscape of mechanically unfolded model proteins: extended Jarzinsky versus inherent structure reconstruction
Stefano Luccioli, Alberto Imparato, Alessandro Torcini
The equilibrium free energy landscape of off-lattice model heteropolymers as a function of an internal coordinate, namely the end-to-end distance, is reconstructed from out-of-equi…
Chaotic synchronizations of spatially extended systems as non-equilibrium phase transitions
M. Cencini, C. J. Tessone, A. Torcini
Two replicas of spatially extended chaotic systems synchronize to a common spatio-temporal chaotic state when coupled above a critical strength. As a prototype of each single spati…