85 citations · 253 across the 29 of their papers we have counts for
5 papers · 1 filter
High-dimensional regression over disease subgroups
Frank Dondelinger, Sach Mukherjee, The Alzheimer's Disease Neuroimaging Initiative
We consider high-dimensional regression over subgroups of observations. Our work is motivated by biomedical problems, where disease subtypes, for example, may differ with respect t…
Causal network inference using biochemical kinetics
C. J. Oates, F. Dondelinger, N. Bayani +3
Network models are widely used as structural summaries of biochemical systems. Statistical estimation of networks is usually based on linear or discrete models. However, the dynami…
Network Inference Using Steady State Data and Goldbeter-Koshland Kinetics
Chris J Oates, Bryan T Hennessy, Yiling Lu +2
Network inference approaches are widely used to shed light on regulatory interplay between molecular players such as genes and proteins. Biochemical processes underlying networks o…
On the relationship between ODEs and DBNs
Chris. J. Oates, Steven. M. Hill, Sach Mukherjee
Recently, Li et al. (Bioinformatics 27(19), 2686-91, 2011) proposed a method, called Differential Equation-based Local Dynamic Bayesian Network (DELDBN), for reverse engineering ge…
Network inference and biological dynamics
Chris. J. Oates, Sach Mukherjee
Network inference approaches are now widely used in biological applications to probe regulatory relationships between molecular components such as genes or proteins. Many methods h…