217 citations · 447 across the 5 of their papers we have counts for
5 papers
Global epistasis on fitness landscapes
Juan Diaz-Colunga, Abigail Skwara, Karna Gowda +4
Epistatic interactions between mutations add substantial complexity to adaptive landscapes, and are often thought of as detrimental to our ability to predict evolution. Yet, patter…
Computation Of Microbial Ecosystems in Time and Space (COMETS): An open source collaborative platform for modeling ecosystems metabolism
Ilija Dukovski, Djordje Bajić, Jeremy M Chacón +10
Genome-scale stoichiometric modeling of metabolism has become a standard systems biology tool for modeling cellular physiology and growth. Extensions of this approach are also emer…
Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities
Robert Marsland, Wenping Cui, Joshua Goldford +3
A fundamental goal of microbial ecology is to understand what determines the diversity, stability, and structure of microbial ecosystems. The microbial context poses special concep…
Dynamics of a producer-parasite ecosystem on the brink of collapse
Andrew Chen, Alvaro Sanchez, Lei Dai +1
Ecosystems can undergo sudden shifts to undesirable states, but recent studies with simple single species ecosystems have demonstrated that advance warning can be provided by the s…
Feedback between population and evolutionary dynamics determines the fate of social microbial populations
Alvaro Sanchez, Jeff Gore
The evolutionary spread of cheater strategies can destabilize populations engaging in cooperative behaviors, thus demonstrating that evolutionary changes can have profound implicat…